爲建立牛病毒性腹瀉病毒(BVDV)務要、牛輪狀病毒(BRV)和牛冠狀病毒(弟請BCoV)的快速檢測方法,根據GenBank中登錄的BVDV 5'-U吧慢TR、BRV NSP5和BCoV N基因序列設計特異性引報通物和探針,通過(guò)優化反應也雜體系和條件,建立了同時(shí)檢測上述3種(zhǒng)病毒的TaqMa制懂n三重RT-qPCR方法。該方法僅對(duì)BVDV 5'-UTR不光、BRV NSP5和BCoV N基因擴增呈陽性,而對(duì)牛傳染性空門鼻氣管炎病毒、牛副流感病毒、魏氏梭菌(A型、B型和D型我海)、多殺性巴氏杆菌(A型和B型)等犢牛腹瀉相關病原擴增均呈陰性;最低檢出限爲1技校0拷貝/μL;組内和組間變異系數均小于2%。利用本研究建立的TaqMan三重R窗科T-qPCR方法對(duì)29份臨床樣(yàng)品進(j視事ìn)行檢測,獲得BVDV、B高資RV、BCoV的4種(zhǒng)混合感染型,其中B線好VDV與BCoV的混合感染率最高(27.6%);與已有單重RT-qPCR方上校法比較,發(fā)現兩(liǎng)種(zhǒn校吧g)方法檢測BVDV、BRV和BCoV的符合率分别爲100%、兵兵96.5%、100%。結果表明,本研究建立的TaqMan三視少重RT-qPCR方法具有特異性強、敏感性高、重複性好(hǎ鐵劇o)、可行性高等優點,可爲今後(hòu)BVDV、BRV和B空開CoV共感染引起(qǐ)的牛腹瀉性疾病的鑒别診斷和流行病學(x愛她ué)調查提供新技術手段。
Establishment of TaqMan Tripl知匠e RT-qPCR for Detecting B哥很VDV,BRV and BCoV
In order to establish多腦 a rapid method for detecting bov子地ine viral diarrhea v睡業irus(BVDV),bovin光算e rotavirus(BRV)and bovine coron物少avirus(BCoV),the specific pri務知mers and probes 很上were designed accor如高ding to the sequence票冷s of 5'-UTR,BRV NSP5 and BCoV N要化 genes registered in GenBank,follo校從wed by the optimi湖關zation of reaction systems and condi劇綠tions,then the TaqMan tri日她ple RT-qPCR was establishe裡答d to simultaneously detect the a樂又bove three viruses.呢區 By which,positive resul紅做ts only occurred in the amp照請lification of BVDV 5'-UTR,BR嗎裡V NSP5 and BCoV N gene人信s,but negative for infect聽理ious bovine rhinotrachei開秒tis virus(IBRV),bovine parainf話快luenza virus(BPIV),Clostrid件說ium welchii(type 花兒A,B and D),Pasteurella multocida(type美動 A and B)and other pathoge看間ns related to calf dia少能rrhea;the minimum detection limit was 老匠10 copies/μL;and the va新員riation coefficients of intra-and inter又愛-group were less t志跳han 2%. 29 clinical sam體兵ples were detected by the est離購ablished method,the four types of c低這o-infection of BVDV,BRV and BCoV人是 were obtained,in which,the c風作o-infection rate of BVDV and BCoV房歌 was highest(up to 27.6%). 一但The coincidence r能中ates of current single RT-qPCR and t外妹he established method for B慢麗VDV,BRV and BCoV were 1廠間00%,96.5% and 100%,respectiv綠物ely. As a conclusion,the established 道紙method could be applied in differenti能明al diagnosis and epidemio舞新logical investigation 好什against bovine di我通arrhoeal diseases ca開大used by the co-infection舞兒 with BVDV,BRV and BCoV in the future 和她due to its advantages他術 of good specificity,sensit市農ivity,repeatability and feasibi這文lity.
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